Bioresour Technol 64:7–15Piotrowska-Seget Z, Cycoń M, Kozdroj J (2005) Metal-tolerant bacteria occurring in heavily polluted soil and mine spoil. Evol Bioinformatics 4.Tedersoo L, Nilsson RH, Abarenkov K, Jairus T, Sadam A, Saar I, Bahram M, Bechem E, Chuyong G, Kõljalg U (2010) 454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases. J Basic Microbiol 46:145–152Cannon PF, Kirk PM (2007) Fungal families of the world. Desert fever: A disease also called coccidioidomycosis (CM) due to a fungus called Coccidioides immitis. eryngii is the commonest one, with a worldwide distribution, while P. eryngii var. Soil Biol Biochem 57:204–211Yanagawa K, Morono Y, de Beer D, Haeckel M, Sunamura M, Futagami T, Hoshino T, Terada T, K-i N, Urabe T (2013) Metabolically active microbial communities in marine sediment under high-CO2 and low-pH extremes. GO and KEGG analysis showed that these expanded gene families in the two genomes were both mainly associated with carbohydrate metabolic process, hydrolase activity, transmembrane transport, kinase activity, and transferase activity. Science 346:1256688Baird R, Stokes CE, Wood-Jones A, Alexander M, Watson C, Taylor G, Johnson K, Remaley T, Diehl S (2014) Fleshy saprobic and ectomycorrhizal fungal communities associated with healthy and declining eastern hemlock stands in Great Smoky Mountains National Park. Mol Ecol 2:113–118White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. All authors have read and approved the manuscript.This work was supported by National Natural Science Foundation of China (No. Likewise, there were 214 GHs, 23 PLs, 68 GTs, 63 CEs, 94 AAs, and 73 CBMs in the PEF12.To further perform comparative genomic analysis between To further estimate the genome evolution of the genus Native selective pressures could lead to gene expansion and contraction during species evolution. J Environ Qual 31:581–589Bradl HB (2004) Adsorption of heavy metal ions on soils and soils constituents. Microbiol., 03 September 2019 The ISME J 7:555–567Sorokin DY, Berben T, Melton ED, Overmars L, Vavourakis CD, Muyzer G (2014) Microbial diversity and biogeochemical cycling in soda lakes. Annu Rev Ecol Evol Syst 36:243–266Kim M, Boldgiv B, Singh D, Chun J, Lkhagva A, Adams JM (2013) Structure of soil bacterial communities in relation to environmental variables in a semi-arid region of Mongolia. The genus Blaudez D, Jacob C, Turnau K, Colpaert J, Ahonen-Jonnarth U, Finlay R, Botton B, Chalot M (2000) Differential responses of ectomycorrhizal fungi to heavy metals in vitro. Among them, there were 218 genes encoding glycoside hydrolases (GHs), 28 genes encoding polysaccharide lyases (PLs), 77 genes encoding glycosyltransferases (GTs), 69 genes encoding carbohydrate esterases (CEs), 98 genes encoding auxiliary activities (AAs), and 61 genes encoding carbohydrate binding modules (CBMs) in the PEE81 genome. This suggests that the chromosomes might experience a series of fusions or breakages during the long evolutionary process of Previous research has shown that large number of organism explosion (such as flowering plants) during the Tertiary period (66–2.58 Mya), which experienced global warming and relatively high sea levels (The expansion and contraction of a large number of gene families occurred during the evolution of As genome research applied on edible mushrooms has existed for only several years from now, few population genomic studies based on the whole genome sequencing were available (Based on the population selection analysis using PEF12 genome as the reference genome, we identified some genes that might be associated with the adaptation of In this study, we obtained the high-quality whole genome sequences of wild strains of The raw datasets generated for this manuscript have been uploaded to GenBank, accession numbers SZVJ00000000 (PEE81) and SPUN00000000 (PEF12).YF and YL conceptualized the study and provided funding.
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